Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS34365

Experiment: Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X
3,317,584	+				-0.7
3,317,646	+				-0.9
3,317,660	-				-0.1
3,317,868	+				-0.0
3,317,868	+				-0.2
3,317,869	-				-0.1
3,317,874	-				-0.3
3,318,164	-		BPHYT_RS34365	0.32	-0.1
3,318,167	-		BPHYT_RS34365	0.33	-0.2
3,318,167	-		BPHYT_RS34365	0.33	-0.2
3,318,167	-		BPHYT_RS34365	0.33	-0.2
3,318,381	-		BPHYT_RS34365	0.68	-0.2
3,318,381	-		BPHYT_RS34365	0.68	+0.7
3,318,607	+				+0.1
3,318,607	+				+0.4
3,319,000	+		BPHYT_RS34370	0.59	+0.1
3,319,000	+		BPHYT_RS34370	0.59	+0.3
3,319,001	-		BPHYT_RS34370	0.59	+0.9
3,319,001	-		BPHYT_RS34370	0.59	+0.7
3,319,001	-		BPHYT_RS34370	0.59	-0.8
3,319,018	-		BPHYT_RS34370	0.66	-1.1
3,319,153	+				+0.3
3,319,170	-				+0.8
3,319,228	+				-0.2
3,319,249	-				-0.0
3,319,249	-				-1.1
3,319,275	+				+0.1
3,319,276	-				+0.1
3,319,276	-				+0.2
3,319,330	+				+0.7
3,319,331	-				-0.1
3,319,377	+				+0.8
3,319,446	+				-0.1
3,319,447	-				-1.1