Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS32280

Experiment: Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X
2,811,099	+				-0.2
2,811,177	+				-0.2
2,811,178	-				-0.2
2,811,406	-		BPHYT_RS32275	0.32	-0.6
2,811,428	+		BPHYT_RS32275	0.35	-0.6
2,811,429	-		BPHYT_RS32275	0.35	-1.4
2,811,460	-		BPHYT_RS32275	0.38	-1.0
2,811,460	-		BPHYT_RS32275	0.38	-0.3
2,811,626	+		BPHYT_RS32275	0.56	-0.3
2,812,165	+		BPHYT_RS32280	0.16	-1.3
2,812,208	-		BPHYT_RS32280	0.22	+0.5
2,812,427	-		BPHYT_RS32280	0.52	-0.0
2,812,570	-		BPHYT_RS32280	0.71	-0.5
2,813,009	+				-0.1
2,813,016	-				+1.0
2,813,400	-		BPHYT_RS32285	0.15	-0.4