Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS32160

Experiment: Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X
2,787,710	-		BPHYT_RS32155	0.36	-1.7
2,787,816	-		BPHYT_RS32155	0.46	-1.9
2,787,816	-		BPHYT_RS32155	0.46	-1.0
2,788,158	+		BPHYT_RS32155	0.76	-1.3
2,788,158	+		BPHYT_RS32155	0.76	-0.6
2,788,587	+		BPHYT_RS32160	0.14	+0.6
2,788,833	+		BPHYT_RS32160	0.33	-0.8
2,789,235	+		BPHYT_RS32160	0.66	+0.3
2,789,238	+		BPHYT_RS32160	0.66	+0.2
2,789,238	+		BPHYT_RS32160	0.66	+0.4
2,789,737	+				-1.4
2,789,738	-		BPHYT_RS32165	0.10	-1.0
2,789,782	-		BPHYT_RS32165	0.15	-0.3
2,790,099	+		BPHYT_RS32165	0.53	-2.2
2,790,100	-		BPHYT_RS32165	0.54	-1.5
2,790,367	+		BPHYT_RS32165	0.86	-1.0
2,790,524	-				-0.4
2,790,618	+		BPHYT_RS32170	0.19	-0.3