Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS30880

Experiment: Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X
2,481,520	+				-1.1
2,481,867	+				-0.1
2,482,335	+		BPHYT_RS30880	0.12	+0.4
2,483,190	+		BPHYT_RS30880	0.64	-1.8
2,483,200	-		BPHYT_RS30880	0.65	+0.3
2,483,226	+		BPHYT_RS30880	0.66	+2.1
2,483,330	+		BPHYT_RS30880	0.73	-0.0
2,483,940	+				-0.3
2,484,040	-		BPHYT_RS30885	0.35	+3.1
2,484,040	-		BPHYT_RS30885	0.35	-0.2
2,484,140	+		BPHYT_RS30885	0.68	-0.5
2,484,723	+		BPHYT_RS30890	0.56	+0.3