Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS28410

Experiment: Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X
1,926,829	-		BPHYT_RS28405	0.28	-0.8
1,927,139	+		BPHYT_RS28405	0.51	-0.9
1,927,443	-		BPHYT_RS28405	0.72	+0.2
1,927,489	+		BPHYT_RS28405	0.76	+0.5
1,927,882	+				+2.4
1,928,078	+		BPHYT_RS28410	0.25	-1.1
1,928,079	-		BPHYT_RS28410	0.25	-1.0
1,928,227	-		BPHYT_RS28410	0.39	+0.4
1,928,808	+				+0.1
1,928,868	-				+0.0
1,929,213	+		BPHYT_RS28415	0.34	+0.5
1,929,270	+		BPHYT_RS28415	0.40	-0.5
1,929,433	+		BPHYT_RS28415	0.58	+0.7
1,929,433	+		BPHYT_RS28415	0.58	-1.2