Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS25280

Experiment: Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X
1,247,207	-		BPHYT_RS25275	0.72	-0.1
1,247,552	-				-0.6
1,247,602	+				-0.5
1,248,621	+		BPHYT_RS25280	0.52	-0.0
1,248,628	-		BPHYT_RS25280	0.52	+0.6
1,248,972	+		BPHYT_RS25280	0.76	-0.7
1,248,973	-		BPHYT_RS25280	0.76	-0.5
1,248,973	-		BPHYT_RS25280	0.76	-0.7
1,249,458	+				+0.4
1,249,512	+				-0.2
1,249,542	+				-0.2
1,249,758	+		BPHYT_RS25285	0.14	+0.4
1,249,973	+		BPHYT_RS25285	0.35	+2.6
1,249,973	+		BPHYT_RS25285	0.35	-0.4