Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS25065

Experiment: Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X
1,193,480	+		BPHYT_RS25060	0.82	+0.1
1,193,506	+		BPHYT_RS25060	0.84	+0.6
1,193,708	+				-0.1
1,193,999	+				+0.1
1,194,000	-				+0.4
1,194,003	+				-2.3
1,194,003	+				+0.8
1,194,004	-				-0.2
1,194,004	-				-1.4
1,194,004	-				+0.3
1,194,004	-				-0.5
1,194,004	-				+0.2
1,194,042	-				-0.4
1,194,042	-				+1.1
1,194,042	-				-1.6
1,194,156	+				+0.1
1,194,157	-				+0.1
1,194,187	-				-0.0
1,195,171	-		BPHYT_RS25065	0.82	-0.7
1,195,310	+				+0.6
1,195,311	-				+0.8
1,195,608	+		BPHYT_RS25070	0.26	-1.5
1,196,228	+				+0.8