Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS25005

Experiment: Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X
1,179,309	+		BPHYT_RS25000	0.57	-1.2
1,179,310	-		BPHYT_RS25000	0.58	-1.2
1,179,310	-		BPHYT_RS25000	0.58	+1.0
1,180,002	+		BPHYT_RS25005	0.23	+1.4
1,180,003	-		BPHYT_RS25005	0.23	+1.7
1,180,747	+				+0.6
1,180,818	-		BPHYT_RS25010	0.14	+0.0
1,180,849	-		BPHYT_RS25010	0.17	-0.5
1,180,849	-		BPHYT_RS25010	0.17	-1.5
1,181,336	-		BPHYT_RS25010	0.52	+0.0