Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS24095

Experiment: Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X
971,877	+		BPHYT_RS24090	0.50	-0.3
972,327	+				-1.3
972,328	-				-0.4
972,400	-				-1.5
973,271	-		BPHYT_RS24095	0.60	-1.1
973,531	-		BPHYT_RS24095	0.79	-1.8
973,680	+		BPHYT_RS24095	0.89	-1.7
973,681	-		BPHYT_RS24095	0.89	-0.5
973,683	+		BPHYT_RS24095	0.89	-2.6
973,684	-		BPHYT_RS24095	0.90	+0.4
974,298	-				+0.4
974,314	-				+2.7
974,394	-				-0.7
974,582	+				+0.5
974,582	+				+0.9
974,582	+				-2.0
974,814	+		BPHYT_RS24105	0.26	+0.2