Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS16250

Experiment: Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X
3,688,389	-		BPHYT_RS16245	0.28	-1.6
3,688,389	-		BPHYT_RS16245	0.28	-0.6
3,688,611	-		BPHYT_RS16245	0.46	-1.3
3,688,770	-		BPHYT_RS16245	0.60	-3.4
3,688,915	-		BPHYT_RS16245	0.72	+0.1
3,688,963	-		BPHYT_RS16245	0.76	-4.8
3,689,257	-				+0.6
3,689,257	-				+1.4
3,689,257	-				-0.0
3,689,301	+				-0.6
3,689,301	+				+0.1
3,689,302	-				+0.1
3,689,302	-				-0.4
3,689,374	-				+0.7
3,689,587	-		BPHYT_RS16250	0.41	-2.6
3,689,894	-				-0.2
3,689,894	-				+0.1
3,690,016	-				-0.1
3,690,166	-				+0.3
3,690,427	-		BPHYT_RS16255	0.34	+0.4
3,690,445	-		BPHYT_RS16255	0.36	-1.5
3,690,445	-		BPHYT_RS16255	0.36	+1.4
3,690,445	-		BPHYT_RS16255	0.36	-3.2
3,690,445	-		BPHYT_RS16255	0.36	-2.2
3,690,446	+		BPHYT_RS16255	0.36	+1.4
3,690,447	-		BPHYT_RS16255	0.36	+0.1
3,690,447	-		BPHYT_RS16255	0.36	+0.4