Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS09510

Experiment: Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X
2,154,557	+		BPHYT_RS09505	0.61	-0.1
2,154,989	+		BPHYT_RS09505	0.88	-0.2
2,154,999	-		BPHYT_RS09505	0.89	+0.2
2,155,228	+				-0.2
2,155,229	-				-0.5
2,155,233	+				-0.3
2,155,297	-				-0.4
2,156,193	+		BPHYT_RS09510	0.69	-1.1
2,156,194	-		BPHYT_RS09510	0.69	-0.3
2,156,472	+				-0.6
2,156,472	+				+0.7
2,156,472	+				+0.1
2,156,473	-				+0.4
2,156,544	+				-0.2
2,156,545	-				-0.4
2,156,917	-				-5.3
2,156,999	+				-0.2
2,157,544	-		BPHYT_RS09515	0.13	-0.8