Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS08995

Experiment: Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X
2,035,788	+		BPHYT_RS08990	0.70	-1.2
2,035,953	+		BPHYT_RS08990	0.76	+0.3
2,036,008	-		BPHYT_RS08990	0.78	-0.7
2,036,010	-		BPHYT_RS08990	0.78	-0.4
2,036,929	+		BPHYT_RS08995	0.48	-1.0
2,036,930	-		BPHYT_RS08995	0.48	-2.1
2,037,303	+				-0.6
2,037,304	-				+0.4
2,037,365	+				+0.5
2,037,610	-		BPHYT_RS09000	0.41	-0.2
2,037,943	+				-0.6
2,037,943	+				-0.4
2,037,944	-				+0.8
2,037,944	-				-0.3
2,037,944	-				+0.1
2,037,944	-				+0.7
2,038,055	-				+0.3
2,038,060	+				-0.0
2,038,061	-				+0.7