Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS08805

Experiment: Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X
1,994,519	+		BPHYT_RS08800	0.18	-0.8
1,994,662	+		BPHYT_RS08800	0.31	-0.2
1,994,753	+		BPHYT_RS08800	0.40	-0.0
1,994,753	+		BPHYT_RS08800	0.40	-0.8
1,994,753	+		BPHYT_RS08800	0.40	-0.0
1,994,753	+		BPHYT_RS08800	0.40	+0.7
1,994,753	+		BPHYT_RS08800	0.40	-0.3
1,994,753	+		BPHYT_RS08800	0.40	+1.1
1,995,258	-		BPHYT_RS08800	0.88	+0.2
1,995,383	+				+0.6
1,995,816	+		BPHYT_RS08805	0.41	-0.4
1,995,885	-		BPHYT_RS08805	0.47	+1.4
1,995,946	-		BPHYT_RS08805	0.53	-0.4
1,996,057	+		BPHYT_RS08805	0.63	-1.6
1,996,057	+		BPHYT_RS08805	0.63	-1.1
1,996,204	+		BPHYT_RS08805	0.77	-0.9
1,996,205	-		BPHYT_RS08805	0.77	-0.4
1,996,208	+		BPHYT_RS08805	0.78	-1.4
1,996,790	+		BPHYT_RS08810	0.28	-0.3
1,996,848	-		BPHYT_RS08810	0.34	-1.0
1,997,021	+		BPHYT_RS08810	0.53	-0.5
1,997,022	-		BPHYT_RS08810	0.53	+0.3
1,997,120	+		BPHYT_RS08810	0.63	+0.1
1,997,228	+		BPHYT_RS08810	0.75	-0.3
1,997,273	+		BPHYT_RS08810	0.80	+0.9