Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS05020

Experiment: Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X
1,155,533	-				-2.4
1,156,290	-				-2.2
1,156,634	-		BPHYT_RS05020	0.15	-1.8
1,157,354	-		BPHYT_RS05020	0.64	-1.6
1,157,536	+		BPHYT_RS05020	0.77	-1.4
1,157,696	+		BPHYT_RS05020	0.87	-3.8
1,157,697	-		BPHYT_RS05020	0.88	-2.2
1,157,697	-		BPHYT_RS05020	0.88	-2.3
1,157,697	-		BPHYT_RS05020	0.88	-0.5
1,157,965	-				-1.6
1,157,998	+				-0.1
1,158,182	-				+0.4
1,158,419	+				-0.9
1,158,420	-				+2.3
1,158,420	-				-1.0
1,158,587	+		BPHYT_RS05025	0.13	-1.0
1,158,797	-				-2.0
1,158,857	+		BPHYT_RS05025	0.35	-1.3