Experiment: Parafilmed volatile agar plate with no fungus
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SM_b21064 and SM_b21065 are separated by 15 nucleotides SM_b21065 and SM_b21066 overlap by 4 nucleotides SM_b21066 and SM_b21067 are separated by 15 nucleotides
SM_b21064: SM_b21064 - hypothetical protein, at 698,639 to 699,172
_b21064
SM_b21065: SM_b21065 - hypothetical protein, at 699,188 to 700,165
_b21065
SM_b21066: SM_b21066 - glycosyltransferase, at 700,162 to 701,115
_b21066
SM_b21067: SM_b21067 - NDP-hexose methyltransferase, at 701,131 to 702,336
_b21067
Position (kb) 700
701
702 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 699.280 kb on + strand at 699.281 kb on - strand at 699.306 kb on + strand, within SM_b21065 at 699.307 kb on - strand, within SM_b21065 at 699.307 kb on - strand, within SM_b21065 at 699.307 kb on - strand, within SM_b21065 at 699.351 kb on - strand, within SM_b21065 at 699.372 kb on + strand, within SM_b21065 at 699.373 kb on - strand, within SM_b21065 at 699.415 kb on - strand, within SM_b21065 at 699.586 kb on + strand, within SM_b21065 at 699.636 kb on - strand, within SM_b21065 at 699.636 kb on - strand, within SM_b21065 at 699.657 kb on + strand, within SM_b21065 at 699.671 kb on + strand, within SM_b21065 at 699.856 kb on + strand, within SM_b21065 at 699.867 kb on + strand, within SM_b21065 at 699.939 kb on - strand, within SM_b21065 at 699.939 kb on - strand, within SM_b21065 at 699.973 kb on + strand, within SM_b21065 at 699.973 kb on + strand, within SM_b21065 at 699.973 kb on + strand, within SM_b21065 at 699.973 kb on + strand, within SM_b21065 at 699.973 kb on + strand, within SM_b21065 at 699.974 kb on - strand, within SM_b21065 at 699.974 kb on - strand, within SM_b21065 at 700.165 kb on + strand at 700.166 kb on - strand at 700.199 kb on - strand at 700.207 kb on + strand at 700.356 kb on + strand, within SM_b21066 at 700.356 kb on + strand, within SM_b21066 at 700.571 kb on + strand, within SM_b21066 at 700.571 kb on + strand, within SM_b21066 at 700.571 kb on + strand, within SM_b21066 at 700.571 kb on + strand, within SM_b21066 at 700.572 kb on - strand, within SM_b21066 at 700.572 kb on - strand, within SM_b21066 at 700.574 kb on + strand, within SM_b21066 at 700.575 kb on - strand, within SM_b21066 at 700.575 kb on - strand, within SM_b21066 at 700.758 kb on + strand, within SM_b21066 at 700.758 kb on + strand, within SM_b21066 at 700.759 kb on - strand, within SM_b21066 at 700.759 kb on - strand, within SM_b21066 at 700.763 kb on + strand, within SM_b21066 at 700.801 kb on + strand, within SM_b21066 at 700.801 kb on + strand, within SM_b21066 at 700.859 kb on + strand, within SM_b21066 at 700.859 kb on + strand, within SM_b21066 at 700.860 kb on - strand, within SM_b21066 at 700.931 kb on + strand, within SM_b21066 at 700.932 kb on - strand, within SM_b21066 at 700.936 kb on + strand, within SM_b21066 at 701.005 kb on - strand, within SM_b21066 at 701.011 kb on - strand, within SM_b21066 at 701.011 kb on - strand, within SM_b21066 at 701.063 kb on - strand at 701.063 kb on - strand at 701.081 kb on + strand at 701.082 kb on - strand at 701.082 kb on - strand at 701.082 kb on - strand at 701.130 kb on - strand at 701.202 kb on - strand at 701.242 kb on + strand at 701.288 kb on + strand, within SM_b21067 at 701.288 kb on + strand, within SM_b21067 at 701.289 kb on - strand, within SM_b21067 at 701.289 kb on - strand, within SM_b21067 at 701.289 kb on - strand, within SM_b21067 at 701.458 kb on + strand, within SM_b21067 at 701.459 kb on - strand, within SM_b21067 at 701.565 kb on + strand, within SM_b21067 at 701.565 kb on + strand, within SM_b21067 at 701.566 kb on - strand, within SM_b21067 at 701.566 kb on - strand, within SM_b21067 at 701.566 kb on - strand, within SM_b21067 at 701.567 kb on + strand, within SM_b21067 at 701.567 kb on + strand, within SM_b21067 at 701.568 kb on - strand, within SM_b21067 at 701.568 kb on - strand, within SM_b21067 at 701.568 kb on - strand, within SM_b21067 at 701.568 kb on - strand at 701.580 kb on - strand, within SM_b21067 at 701.580 kb on - strand, within SM_b21067 at 701.667 kb on - strand, within SM_b21067 at 701.667 kb on - strand, within SM_b21067 at 701.669 kb on + strand, within SM_b21067 at 701.669 kb on + strand, within SM_b21067 at 701.670 kb on - strand, within SM_b21067 at 701.670 kb on - strand, within SM_b21067 at 701.742 kb on + strand, within SM_b21067 at 701.742 kb on + strand, within SM_b21067 at 701.742 kb on + strand, within SM_b21067 at 701.797 kb on - strand, within SM_b21067 at 701.808 kb on + strand, within SM_b21067 at 701.808 kb on + strand, within SM_b21067 at 701.824 kb on + strand, within SM_b21067 at 701.846 kb on + strand, within SM_b21067 at 701.846 kb on + strand, within SM_b21067 at 702.032 kb on - strand, within SM_b21067 at 702.032 kb on - strand, within SM_b21067 at 702.032 kb on - strand, within SM_b21067
Per-strain Table
Position Strand Gene LocusTag Fraction Parafilmed volatile agar plate with no fungus remove 699,280 + -0.3 699,281 - +0.3 699,306 + SM_b21065 0.12 -0.7 699,307 - SM_b21065 0.12 +0.8 699,307 - SM_b21065 0.12 -0.1 699,307 - SM_b21065 0.12 +0.8 699,351 - SM_b21065 0.17 -0.2 699,372 + SM_b21065 0.19 +2.7 699,373 - SM_b21065 0.19 -0.2 699,415 - SM_b21065 0.23 -0.2 699,586 + SM_b21065 0.41 +1.0 699,636 - SM_b21065 0.46 +0.7 699,636 - SM_b21065 0.46 +1.0 699,657 + SM_b21065 0.48 -1.0 699,671 + SM_b21065 0.49 +1.0 699,856 + SM_b21065 0.68 +0.1 699,867 + SM_b21065 0.69 -0.6 699,939 - SM_b21065 0.77 -0.2 699,939 - SM_b21065 0.77 -0.6 699,973 + SM_b21065 0.80 +0.3 699,973 + SM_b21065 0.80 +0.3 699,973 + SM_b21065 0.80 -1.8 699,973 + SM_b21065 0.80 +0.7 699,973 + SM_b21065 0.80 +0.0 699,974 - SM_b21065 0.80 +2.7 699,974 - SM_b21065 0.80 -1.5 700,165 + +1.0 700,166 - -0.6 700,199 - +0.3 700,207 + -1.9 700,356 + SM_b21066 0.20 +0.2 700,356 + SM_b21066 0.20 +0.0 700,571 + SM_b21066 0.43 +0.9 700,571 + SM_b21066 0.43 +0.8 700,571 + SM_b21066 0.43 +0.2 700,571 + SM_b21066 0.43 +1.8 700,572 - SM_b21066 0.43 -0.7 700,572 - SM_b21066 0.43 +1.1 700,574 + SM_b21066 0.43 -0.0 700,575 - SM_b21066 0.43 -0.2 700,575 - SM_b21066 0.43 +1.4 700,758 + SM_b21066 0.62 -0.0 700,758 + SM_b21066 0.62 -0.2 700,759 - SM_b21066 0.63 +1.7 700,759 - SM_b21066 0.63 +2.3 700,763 + SM_b21066 0.63 +0.2 700,801 + SM_b21066 0.67 -0.2 700,801 + SM_b21066 0.67 -0.3 700,859 + SM_b21066 0.73 -0.2 700,859 + SM_b21066 0.73 -0.4 700,860 - SM_b21066 0.73 +1.3 700,931 + SM_b21066 0.81 +1.5 700,932 - SM_b21066 0.81 +0.5 700,936 + SM_b21066 0.81 +0.3 701,005 - SM_b21066 0.88 -0.3 701,011 - SM_b21066 0.89 +1.3 701,011 - SM_b21066 0.89 +2.3 701,063 - -1.9 701,063 - +0.4 701,081 + -0.9 701,082 - +2.3 701,082 - -0.1 701,082 - +3.1 701,130 - +1.2 701,202 - -0.6 701,242 + +0.2 701,288 + SM_b21067 0.13 -0.1 701,288 + SM_b21067 0.13 -1.1 701,289 - SM_b21067 0.13 +0.2 701,289 - SM_b21067 0.13 +0.7 701,289 - SM_b21067 0.13 +0.8 701,458 + SM_b21067 0.27 -1.6 701,459 - SM_b21067 0.27 +0.1 701,565 + SM_b21067 0.36 +1.1 701,565 + SM_b21067 0.36 +2.9 701,566 - SM_b21067 0.36 +0.9 701,566 - SM_b21067 0.36 -0.2 701,566 - SM_b21067 0.36 -2.6 701,567 + SM_b21067 0.36 -2.0 701,567 + SM_b21067 0.36 +2.1 701,568 - SM_b21067 0.36 +2.1 701,568 - SM_b21067 0.36 -0.5 701,568 - SM_b21067 0.36 -2.8 701,568 - +1.7 701,580 - SM_b21067 0.37 +0.9 701,580 - SM_b21067 0.37 -0.3 701,667 - SM_b21067 0.44 +1.0 701,667 - SM_b21067 0.44 +1.7 701,669 + SM_b21067 0.45 +1.1 701,669 + SM_b21067 0.45 -1.5 701,670 - SM_b21067 0.45 +1.8 701,670 - SM_b21067 0.45 +0.7 701,742 + SM_b21067 0.51 -0.7 701,742 + SM_b21067 0.51 +0.7 701,742 + SM_b21067 0.51 -2.1 701,797 - SM_b21067 0.55 -0.5 701,808 + SM_b21067 0.56 -1.1 701,808 + SM_b21067 0.56 -1.1 701,824 + SM_b21067 0.57 +0.7 701,846 + SM_b21067 0.59 +0.9 701,846 + SM_b21067 0.59 -2.6 702,032 - SM_b21067 0.75 -0.0 702,032 - SM_b21067 0.75 -0.2 702,032 - SM_b21067 0.75 -0.2
Or see this region's nucleotide sequence