Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS35315

Experiment: Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X
3,520,812	+				+0.0
3,520,961	+		BPHYT_RS35310	0.19	-0.5
3,520,962	-		BPHYT_RS35310	0.19	-0.2
3,521,111	+		BPHYT_RS35310	0.50	-0.1
3,521,429	-				+0.5
3,521,429	-				+0.6
3,521,436	-				-2.9
3,521,743	+				+0.3
3,521,844	+				+0.1
3,521,845	-				+1.3
3,521,845	-				+0.3
3,522,031	+		BPHYT_RS35315	0.25	-3.0
3,522,536	-		BPHYT_RS35315	0.67	+1.0
3,522,833	+				+0.4
3,523,180	+		BPHYT_RS35320	0.17	-0.2
3,523,324	+		BPHYT_RS35320	0.36	+0.4
3,523,382	-		BPHYT_RS35320	0.44	+0.5
3,523,862	+				+0.6
3,523,934	+				+0.1