Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS33570

Experiment: Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X
3,115,749	+				+0.2
3,115,749	+				-0.6
3,115,750	-				-0.6
3,115,750	-				+0.3
3,115,759	-				-0.7
3,115,759	-				-1.7
3,115,843	-		BPHYT_RS33570	0.10	-1.1
3,115,843	-		BPHYT_RS33570	0.10	-1.7
3,116,069	-		BPHYT_RS33570	0.38	+1.7
3,116,079	+		BPHYT_RS33570	0.40	+0.1
3,116,779	-				-0.3
3,116,779	-				-0.2