Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS33335

Experiment: Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X
3,060,385	+		BPHYT_RS33330	0.26	+0.8
3,060,937	+		BPHYT_RS33330	0.68	-0.1
3,060,983	+		BPHYT_RS33330	0.71	+0.2
3,060,984	-		BPHYT_RS33330	0.71	-1.1
3,061,191	+		BPHYT_RS33330	0.87	-1.2
3,061,555	+		BPHYT_RS33335	0.14	+1.2
3,061,630	-		BPHYT_RS33335	0.19	+2.5
3,062,096	+		BPHYT_RS33335	0.51	+0.8
3,062,392	-		BPHYT_RS33335	0.72	+0.9
3,062,569	+		BPHYT_RS33335	0.84	+0.2
3,062,577	+		BPHYT_RS33335	0.85	+0.4
3,062,577	+		BPHYT_RS33335	0.85	-0.9
3,062,700	-				+3.3
3,062,824	-				+1.5
3,062,874	+				+0.1
3,062,875	-				-0.8
3,063,175	-		BPHYT_RS33340	0.60	-0.0
3,063,331	-		BPHYT_RS33340	0.87	-0.1
3,063,468	+				-0.5
3,063,469	-				+1.8
3,063,473	-				+0.3
3,063,473	-				+1.0
3,063,618	-				+0.9
3,063,663	-				-0.5
3,063,663	-				-0.6
3,063,665	-				+0.8
3,063,672	+				+0.1
3,063,672	+				+0.3
3,063,769	-				+0.3