Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS33165

Experiment: Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X
3,015,773	+				+0.5
3,016,022	+				+0.1
3,016,096	+				-0.8
3,016,203	-		BPHYT_RS33160	0.29	+0.3
3,016,319	-		BPHYT_RS33160	0.51	+0.6
3,016,336	-		BPHYT_RS33160	0.55	+0.3
3,016,466	-		BPHYT_RS33160	0.80	-2.0
3,016,466	-		BPHYT_RS33160	0.80	-2.6
3,016,573	+				+1.1
3,016,573	+				-0.3
3,016,710	-				+0.8
3,016,832	+		BPHYT_RS33165	0.18	+0.9
3,016,876	+		BPHYT_RS33165	0.23	+1.9
3,017,123	+		BPHYT_RS33165	0.53	+0.5
3,017,164	-		BPHYT_RS33165	0.57	+2.0
3,017,164	-		BPHYT_RS33165	0.57	+2.5
3,017,201	+		BPHYT_RS33165	0.62	+0.5
3,017,252	+		BPHYT_RS33165	0.68	-0.7
3,017,339	-		BPHYT_RS33165	0.78	-2.0
3,017,532	+				+0.2
3,017,532	+				-1.9
3,017,533	-				+0.9
3,017,603	-				+0.7
3,017,748	-				+2.9
3,018,056	+		BPHYT_RS33170	0.34	-0.3
3,018,057	-		BPHYT_RS33170	0.35	+0.6
3,018,074	-		BPHYT_RS33170	0.38	+1.2
3,018,352	+				+1.1
3,018,356	+				+1.1
3,018,402	-				+1.3
3,018,402	-				-1.2
3,018,459	+				+0.3