Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS32420

Experiment: Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X
2,845,779	+		BPHYT_RS32415	0.68	+0.9
2,845,983	+		BPHYT_RS32415	0.79	+0.2
2,846,008	-		BPHYT_RS32415	0.80	+0.3
2,846,195	+		BPHYT_RS32415	0.90	+0.0
2,846,195	+		BPHYT_RS32415	0.90	+0.6
2,846,196	-		BPHYT_RS32415	0.90	-0.5
2,846,264	-				-0.6
2,846,264	-				-0.3
2,846,357	+				-0.7
2,846,358	-				+0.1
2,846,445	-				-0.1
2,846,583	+		BPHYT_RS32420	0.13	+0.3
2,846,584	-		BPHYT_RS32420	0.14	+0.0
2,846,736	-		BPHYT_RS32420	0.24	+0.4
2,846,746	+		BPHYT_RS32420	0.25	-0.5
2,846,746	+		BPHYT_RS32420	0.25	-1.4
2,846,746	+		BPHYT_RS32420	0.25	-0.9
2,847,114	+		BPHYT_RS32420	0.51	-0.2
2,847,114	+		BPHYT_RS32420	0.51	+1.0
2,847,115	-		BPHYT_RS32420	0.51	-0.2
2,847,171	+		BPHYT_RS32420	0.55	+0.1
2,847,610	+		BPHYT_RS32420	0.85	+1.5
2,847,718	-				+0.7
2,847,809	+				-0.8
2,848,035	-		BPHYT_RS32425	0.18	-0.4
2,848,223	+		BPHYT_RS32425	0.37	-0.7
2,848,223	+		BPHYT_RS32425	0.37	+0.2
2,848,224	-		BPHYT_RS32425	0.37	+0.2
2,848,224	-		BPHYT_RS32425	0.37	+0.5
2,848,352	-		BPHYT_RS32425	0.50	-0.6
2,848,517	-		BPHYT_RS32425	0.66	-2.0
2,848,517	-		BPHYT_RS32425	0.66	-0.2