Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS32285

Experiment: Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X
2,812,427	-		BPHYT_RS32280	0.52	+0.3
2,812,570	-		BPHYT_RS32280	0.71	+0.2
2,813,009	+				+0.4
2,813,016	-				-0.1
2,813,400	-		BPHYT_RS32285	0.15	-2.1
2,813,969	+		BPHYT_RS32285	0.63	-0.3
2,813,970	-		BPHYT_RS32285	0.63	+0.2
2,814,071	-		BPHYT_RS32285	0.71	+0.5
2,814,118	-		BPHYT_RS32285	0.75	+0.7
2,814,193	-		BPHYT_RS32285	0.81	-0.2
2,814,198	+		BPHYT_RS32285	0.82	-0.2
2,814,199	-		BPHYT_RS32285	0.82	-2.2
2,814,308	+				+1.0
2,814,535	-				-0.2
2,814,846	+		BPHYT_RS32290	0.47	-0.5
2,814,857	+		BPHYT_RS32290	0.49	-0.1
2,815,094	+		BPHYT_RS32290	0.83	+0.2