Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS31285

Experiment: Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X
2,576,674	+		BPHYT_RS31280	0.37	-1.8
2,576,789	-		BPHYT_RS31280	0.46	-0.3
2,576,789	-		BPHYT_RS31280	0.46	+3.2
2,576,820	+		BPHYT_RS31280	0.48	-0.2
2,577,676	+				-0.0
2,577,677	-				-0.8
2,577,677	-				+0.7
2,577,814	+		BPHYT_RS31285	0.17	+0.4
2,577,815	-		BPHYT_RS31285	0.17	+0.6
2,577,838	+				-3.7
2,578,046	-		BPHYT_RS31285	0.44	-0.9
2,578,046	-		BPHYT_RS31285	0.44	-0.2
2,578,592	-				-0.8
2,578,938	-		BPHYT_RS31290	0.15	-2.2