Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS30610

Experiment: Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X
2,424,104	+		BPHYT_RS30605	0.57	-1.3
2,424,105	-		BPHYT_RS30605	0.57	-0.3
2,424,105	-		BPHYT_RS30605	0.57	+0.2
2,425,212	-		BPHYT_RS30610	0.28	+2.1
2,425,365	-		BPHYT_RS30610	0.39	-0.2
2,425,742	+		BPHYT_RS30610	0.69	+0.3
2,425,742	+		BPHYT_RS30610	0.69	+1.4
2,426,231	+				+1.8
2,426,374	+				+1.8
2,426,375	-				-2.2
2,426,888	-		BPHYT_RS30615	0.62	+0.1