Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS30280

Experiment: Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X
2,347,501	+		BPHYT_RS30275	0.28	-2.2
2,347,502	-		BPHYT_RS30275	0.28	+0.5
2,347,841	-		BPHYT_RS30275	0.53	-0.7
2,347,876	-		BPHYT_RS30275	0.56	+0.1
2,347,879	+		BPHYT_RS30275	0.56	-1.2
2,348,147	-		BPHYT_RS30275	0.76	+0.6
2,348,306	+		BPHYT_RS30275	0.88	-0.3
2,348,391	+				+0.4
2,348,768	+		BPHYT_RS30280	0.42	+0.4
2,348,768	+		BPHYT_RS30280	0.42	+0.7
2,348,769	-		BPHYT_RS30280	0.42	+0.8
2,348,769	-		BPHYT_RS30280	0.42	-0.0
2,348,879	+		BPHYT_RS30280	0.59	-1.3
2,349,113	-				-1.3
2,349,143	+				+0.3
2,349,143	+				+0.4
2,349,189	+				-0.3
2,349,189	+				-0.1
2,349,237	+				+2.1
2,349,249	+				-0.4
2,349,260	-				+0.8
2,349,516	+				-0.4
2,349,609	+				-0.9