Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS29710

Experiment: Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X
2,215,942	-				-0.0
2,216,050	+				-0.6
2,216,050	+				+0.1
2,216,434	-		BPHYT_RS29705	0.36	+1.2
2,216,442	-		BPHYT_RS29705	0.37	-0.7
2,216,660	-		BPHYT_RS29705	0.67	-0.4
2,216,660	-		BPHYT_RS29705	0.67	-0.6
2,217,593	+		BPHYT_RS29710	0.68	+2.0
2,217,621	-		BPHYT_RS29710	0.71	-0.0
2,218,429	+		BPHYT_RS29715	0.23	-1.5
2,218,874	-		BPHYT_RS29715	0.43	+0.9