Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS28845

Experiment: Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X
2,021,669	-		BPHYT_RS28840	0.14	-2.1
2,021,989	+		BPHYT_RS28840	0.44	+0.5
2,022,046	-		BPHYT_RS28840	0.50	+0.2
2,022,283	+		BPHYT_RS28840	0.72	-0.2
2,022,602	-				+0.1
2,022,693	-		BPHYT_RS28845	0.15	-0.6
2,022,869	+		BPHYT_RS28845	0.55	-0.0
2,022,875	+		BPHYT_RS28845	0.56	+0.0
2,022,929	-		BPHYT_RS28845	0.69	-0.2
2,023,840	+		BPHYT_RS28850	0.65	-0.2
2,023,840	+		BPHYT_RS28850	0.65	+0.9