Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS26665

Experiment: Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X
1,550,325	+		BPHYT_RS26660	0.26	-0.6
1,550,336	+		BPHYT_RS26660	0.28	-0.7
1,550,480	-		BPHYT_RS26660	0.48	+0.8
1,550,846	-				-2.5
1,551,085	+		BPHYT_RS26665	0.22	-1.6
1,551,200	-		BPHYT_RS26665	0.38	-0.9
1,551,230	+		BPHYT_RS26665	0.42	-1.9
1,551,257	-		BPHYT_RS26665	0.46	-2.0
1,551,479	+		BPHYT_RS26665	0.77	-0.4
1,551,489	+		BPHYT_RS26665	0.78	-2.4
1,551,567	+		BPHYT_RS26665	0.89	-3.2
1,551,568	-		BPHYT_RS26665	0.89	-1.0
1,551,569	+		BPHYT_RS26665	0.89	-1.2
1,551,570	-		BPHYT_RS26665	0.89	-2.4
1,551,908	+		BPHYT_RS26670	0.24	-1.4
1,551,995	+		BPHYT_RS26670	0.32	-2.6
1,551,995	+		BPHYT_RS26670	0.32	-1.9
1,551,996	-		BPHYT_RS26670	0.32	-1.7
1,552,057	+		BPHYT_RS26670	0.37	-3.7
1,552,440	+		BPHYT_RS26670	0.72	-0.7