Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS26255

Experiment: Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X
1,458,561	+				+0.1
1,458,659	-				-0.4
1,458,759	-				+0.7
1,459,059	-				+0.2
1,459,085	-				-0.1
1,459,085	-				-0.2
1,459,244	-		BPHYT_RS26250	0.31	-0.4
1,459,244	-		BPHYT_RS26250	0.31	-0.9
1,459,308	-		BPHYT_RS26250	0.47	-0.3
1,459,464	+		BPHYT_RS26250	0.84	+0.1
1,459,464	+		BPHYT_RS26250	0.84	-0.6
1,459,465	-		BPHYT_RS26250	0.84	-4.1
1,459,465	-		BPHYT_RS26250	0.84	-1.6
1,459,467	-		BPHYT_RS26250	0.85	-1.4
1,459,841	+		BPHYT_RS26255	0.29	-0.2
1,459,900	+		BPHYT_RS26255	0.34	-0.3
1,459,900	+		BPHYT_RS26255	0.34	-2.2
1,459,936	+		BPHYT_RS26255	0.38	-0.2
1,460,249	-		BPHYT_RS26255	0.69	-0.7
1,460,555	+				-0.8
1,461,028	-		BPHYT_RS26260	0.16	+1.7
1,461,115	+		BPHYT_RS26260	0.20	-0.6
1,461,115	+		BPHYT_RS26260	0.20	+0.6
1,461,115	+		BPHYT_RS26260	0.20	-2.2
1,461,316	+		BPHYT_RS26260	0.29	+0.0