Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS25780

Experiment: Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X
1,355,413	+				+0.3
1,355,484	+				-2.2
1,355,923	+				-0.5
1,356,012	+				+1.4
1,356,062	+				+0.0
1,356,062	+				-0.4
1,356,137	+				-1.7
1,356,720	+		BPHYT_RS25780	0.60	+1.5
1,357,247	-		BPHYT_RS25785	0.16	-0.1
1,357,665	+		BPHYT_RS25785	0.55	+0.8
1,357,666	-		BPHYT_RS25785	0.55	-0.2
1,357,825	-		BPHYT_RS25785	0.70	-1.5