Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS24965

Experiment: Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X
1,172,195	+		BPHYT_RS24960	0.68	-0.4
1,172,298	-		BPHYT_RS24960	0.74	+0.2
1,172,340	+		BPHYT_RS24960	0.77	+0.4
1,172,746	-				+0.1
1,172,826	+				-0.8
1,172,827	-				-0.3
1,172,950	+				+0.1
1,173,139	-				-0.6
1,173,363	-		BPHYT_RS24965	0.65	+0.7
1,173,634	+				+0.3
1,173,637	-				-0.9
1,173,649	+				+0.8
1,173,649	+				+0.8
1,174,255	+		BPHYT_RS24975	0.75	+0.1
1,174,256	-		BPHYT_RS24975	0.75	-0.2
1,174,259	-		BPHYT_RS24975	0.76	-2.2