Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS24840

Experiment: Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X
1,139,606	-				+0.2
1,140,048	-				+0.5
1,140,321	+				+0.6
1,140,589	+				-0.1
1,140,822	+		BPHYT_RS24840	0.21	-1.0
1,140,822	+		BPHYT_RS24840	0.21	+0.3
1,140,823	-		BPHYT_RS24840	0.21	-1.3
1,141,289	+		BPHYT_RS24840	0.63	-0.8
1,141,289	+		BPHYT_RS24840	0.63	-2.5
1,141,473	+		BPHYT_RS24840	0.80	-2.3
1,141,554	+		BPHYT_RS24840	0.87	-1.8
1,141,695	+				-1.2
1,141,703	+				-0.3
1,141,704	-				-0.5
1,141,812	-				-0.9
1,141,887	+				+1.8
1,141,887	+				-2.3
1,141,888	-				-0.5
1,141,888	-				-1.9
1,141,918	-				+0.8
1,141,980	+				+0.4
1,141,981	-				-2.4
1,141,989	+				-0.5
1,142,502	-		BPHYT_RS24845	0.21	-0.4