Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS20400

Experiment: Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X
138,289	+		BPHYT_RS20395	0.33	-0.7
138,290	-		BPHYT_RS20395	0.33	-1.0
138,337	+		BPHYT_RS20395	0.39	-0.4
138,338	-		BPHYT_RS20395	0.40	+1.4
138,633	+		BPHYT_RS20395	0.79	-0.2
138,633	+		BPHYT_RS20395	0.79	-0.7
138,634	-		BPHYT_RS20395	0.79	+0.1
138,634	-		BPHYT_RS20395	0.79	+0.3
138,768	-				+0.5
138,768	-				+0.2
139,832	-				+0.6
139,832	-				-0.3
139,834	-				-0.0
139,842	+				-0.4
139,843	-				-0.6
140,006	-				-0.5
140,283	+				+0.8
140,283	+				-0.1
140,283	+				-1.1
140,356	-		BPHYT_RS20405	0.13	-0.4
140,430	+		BPHYT_RS20405	0.19	-0.5
140,431	-		BPHYT_RS20405	0.19	-2.1
140,431	-		BPHYT_RS20405	0.19	-0.3
140,520	+		BPHYT_RS20405	0.25	-0.1
140,521	-		BPHYT_RS20405	0.26	+4.6
140,521	-		BPHYT_RS20405	0.26	-1.1
140,521	-		BPHYT_RS20405	0.26	-0.8
140,521	-		BPHYT_RS20405	0.26	-0.7