Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS17095

Experiment: Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X
3,873,757	+		BPHYT_RS17085	0.80	-1.4
3,873,758	-		BPHYT_RS17085	0.81	+0.5
3,873,784	+		BPHYT_RS17085	0.85	+0.9
3,873,784	+		BPHYT_RS17085	0.85	+0.3
3,873,785	-		BPHYT_RS17085	0.86	-0.8
3,873,862	+				+0.2
3,874,027	+				-0.6
3,874,644	+				+0.8
3,874,644	+				+0.4
3,874,645	-				-1.3
3,874,645	-				+0.9
3,875,133	+		BPHYT_RS17095	0.27	-2.0
3,875,859	+		BPHYT_RS17095	0.69	+0.1
3,875,860	-		BPHYT_RS17095	0.69	+1.4
3,875,880	+		BPHYT_RS17095	0.70	-1.2
3,875,881	-		BPHYT_RS17095	0.70	-1.7
3,876,028	-		BPHYT_RS17095	0.79	+0.8
3,876,281	-				+0.8
3,876,281	-				-1.2
3,876,282	+				-2.6
3,876,282	+				-0.6
3,876,282	+				-1.4
3,876,283	-				+0.8
3,876,283	-				-2.9
3,876,408	-				+1.0
3,876,506	+				-2.4
3,876,507	-				-0.2
3,876,507	-				+1.7
3,876,507	-				+0.8
3,876,668	+				-0.6
3,876,676	+				-0.7
3,876,679	-				-1.6
3,876,693	+				+1.4
3,876,714	+				-1.5
3,876,875	+		BPHYT_RS17100	0.22	-2.3
3,876,875	+		BPHYT_RS17100	0.22	-1.4
3,876,978	-		BPHYT_RS17100	0.35	-0.8
3,877,142	+		BPHYT_RS17100	0.58	-2.3
3,877,142	+		BPHYT_RS17100	0.58	-0.2
3,877,142	+		BPHYT_RS17100	0.58	-0.8
3,877,142	+		BPHYT_RS17100	0.58	-1.6
3,877,142	+		BPHYT_RS17100	0.58	+0.2
3,877,142	+		BPHYT_RS17100	0.58	-2.0
3,877,142	+		BPHYT_RS17100	0.58	-2.2
3,877,143	-		BPHYT_RS17100	0.58	+0.1
3,877,143	-		BPHYT_RS17100	0.58	-1.8
3,877,143	-		BPHYT_RS17100	0.58	-1.4
3,877,144	+		BPHYT_RS17100	0.58	-1.0
3,877,144	+		BPHYT_RS17100	0.58	-1.2
3,877,144	+		BPHYT_RS17100	0.58	-0.8
3,877,145	-		BPHYT_RS17100	0.58	-2.2
3,877,167	-		BPHYT_RS17100	0.61	-2.1
3,877,329	-		BPHYT_RS17100	0.83	-0.9