Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS16790

Experiment: Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X
3,811,824	-				-0.6
3,811,825	+				-0.2
3,811,826	-				+0.5
3,811,966	-				+0.5
3,812,093	-		BPHYT_RS16790	0.23	+0.5
3,812,203	+		BPHYT_RS16790	0.48	+0.9
3,812,204	-		BPHYT_RS16790	0.48	+0.3
3,812,204	-		BPHYT_RS16790	0.48	+0.6
3,812,307	+		BPHYT_RS16790	0.72	+1.6
3,812,493	-				+0.2
3,812,493	-				+0.5
3,812,521	+				-0.4
3,812,521	+				-0.1
3,812,521	+				-0.1
3,812,522	-				+0.2
3,812,522	-				+0.3
3,812,593	+		BPHYT_RS16795	0.20	-0.3
3,812,593	+		BPHYT_RS16795	0.20	+0.4
3,812,594	-		BPHYT_RS16795	0.20	+0.3
3,812,594	-		BPHYT_RS16795	0.20	+0.2
3,812,719	+		BPHYT_RS16795	0.37	+0.5
3,812,719	+		BPHYT_RS16795	0.37	+0.6
3,813,039	-		BPHYT_RS16795	0.82	-0.6
3,813,139	+				+0.1
3,813,140	-				-0.3
3,813,140	-				+0.2