Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS13550

Experiment: Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X
3,090,601	+		BPHYT_RS13545	0.72	+0.7
3,090,800	-		BPHYT_RS13545	0.81	+0.3
3,091,749	-		BPHYT_RS13550	0.38	+0.1
3,091,749	-		BPHYT_RS13550	0.38	+0.4
3,092,013	-		BPHYT_RS13550	0.60	+5.3
3,092,025	-		BPHYT_RS13550	0.61	+1.1
3,092,409	-				+0.4
3,093,046	+		BPHYT_RS13555	0.48	+0.5
3,093,273	+		BPHYT_RS13555	0.68	+0.7