Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS13340

Experiment: Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X
3,045,414	+				+0.4
3,045,467	-				+0.6
3,045,615	+				+0.9
3,045,931	-		BPHYT_RS13340	0.23	+1.5
3,046,018	-		BPHYT_RS13340	0.29	+0.5
3,046,018	-		BPHYT_RS13340	0.29	+1.4
3,046,087	+		BPHYT_RS13340	0.34	-0.3
3,046,090	-		BPHYT_RS13340	0.34	+1.2
3,047,072	-				-0.1
3,047,072	-				+1.5
3,047,194	+				+0.5
3,047,612	+		BPHYT_RS13345	0.28	+0.1