Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS12615

Experiment: Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X
2,879,745	-		BPHYT_RS12615	0.52	-2.0
2,880,249	+				+0.1
2,880,431	-		BPHYT_RS12620	0.33	+2.3
2,880,830	-				-0.7
2,880,830	-				-0.5
2,880,830	-				-0.5
2,880,830	-				-2.3
2,880,901	+				+0.1
2,880,902	-				+2.0
2,880,990	-				+0.1
2,880,990	-				-0.6
2,880,990	-				-0.7
2,881,011	+		BPHYT_RS12625	0.12	-0.6
2,881,011	+		BPHYT_RS12625	0.12	+0.3
2,881,012	-		BPHYT_RS12625	0.12	+0.5
2,881,012	-		BPHYT_RS12625	0.12	-0.5
2,881,012	-		BPHYT_RS12625	0.12	-0.1