Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS11840

Experiment: Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X
2,683,834	+		BPHYT_RS11830	0.76	+0.2
2,683,981	+		BPHYT_RS11830	0.86	+0.4
2,683,986	+		BPHYT_RS11830	0.86	+2.5
2,683,986	+		BPHYT_RS11830	0.86	+1.0
2,683,987	-		BPHYT_RS11830	0.87	+0.0
2,684,355	-		BPHYT_RS11835	0.79	+0.9
2,684,924	+		BPHYT_RS11840	0.26	+0.5
2,685,118	+		BPHYT_RS11840	0.48	+1.5
2,685,226	-		BPHYT_RS11840	0.60	+1.1
2,685,733	+				-0.1
2,686,531	-				+0.9