Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS11815

Experiment: Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X
2,678,197	-		BPHYT_RS11810	0.54	-0.1
2,678,228	+		BPHYT_RS11810	0.58	-0.2
2,678,534	+				+0.5
2,678,689	-				+0.9
2,678,976	+		BPHYT_RS11815	0.13	+0.2
2,678,979	-		BPHYT_RS11815	0.14	+1.5
2,679,028	-		BPHYT_RS11815	0.19	+2.6
2,679,073	+		BPHYT_RS11815	0.23	+0.4
2,679,150	+		BPHYT_RS11815	0.30	-0.1
2,679,151	-		BPHYT_RS11815	0.31	-2.0
2,679,699	+		BPHYT_RS11815	0.84	+1.2
2,679,700	-		BPHYT_RS11815	0.84	+1.2
2,679,764	-				+2.1
2,679,815	+				-0.6
2,680,156	-		BPHYT_RS11820	0.10	+2.4
2,680,405	+		BPHYT_RS11820	0.27	+0.8
2,680,798	+		BPHYT_RS11820	0.54	+0.8
2,680,799	-		BPHYT_RS11820	0.54	+1.8