Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS11605

Experiment: Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X
2,635,251	-		BPHYT_RS11600	0.25	-0.4
2,635,670	+		BPHYT_RS11600	0.60	+0.7
2,635,689	-		BPHYT_RS11600	0.62	-2.1
2,635,689	-		BPHYT_RS11600	0.62	+0.1
2,635,773	-		BPHYT_RS11600	0.69	+0.9
2,636,177	-				-0.1
2,636,427	-		BPHYT_RS11605	0.18	-0.6
2,636,427	-		BPHYT_RS11605	0.18	+0.1
2,636,436	+		BPHYT_RS11605	0.19	-0.3
2,636,606	+		BPHYT_RS11605	0.30	-0.7
2,636,607	-		BPHYT_RS11605	0.30	+0.0
2,636,607	-		BPHYT_RS11605	0.30	+0.2
2,636,607	-		BPHYT_RS11605	0.30	-2.1
2,636,619	-		BPHYT_RS11605	0.31	+0.6
2,637,251	+		BPHYT_RS11605	0.74	-1.5
2,637,501	-				+0.0
2,637,751	+				+0.9
2,637,752	-				-1.1
2,637,770	+				-0.1
2,637,770	+				-0.9
2,637,771	-				+0.7
2,638,144	-		BPHYT_RS11610	0.58	-1.6
2,638,291	+		BPHYT_RS11610	0.86	+0.3
2,638,318	+				-1.1
2,638,319	-				+0.9
2,638,386	+				-0.3