Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS11290

Experiment: Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X
2,563,315	+		BPHYT_RS11285	0.54	-0.5
2,563,437	+		BPHYT_RS11285	0.66	-1.3
2,563,952	+		BPHYT_RS11290	0.13	-2.0
2,564,288	-		BPHYT_RS11290	0.47	-1.3
2,564,288	-		BPHYT_RS11290	0.47	-0.8
2,564,953	-		BPHYT_RS11295	0.12	-0.3
2,564,964	+		BPHYT_RS11295	0.13	+0.0
2,564,965	-		BPHYT_RS11295	0.13	-0.3
2,565,073	-		BPHYT_RS11295	0.21	+0.5
2,565,081	+		BPHYT_RS11295	0.22	-1.0
2,565,082	-		BPHYT_RS11295	0.22	+0.2
2,565,082	-		BPHYT_RS11295	0.22	+0.5
2,565,114	+		BPHYT_RS11295	0.25	-0.3
2,565,148	-		BPHYT_RS11295	0.27	-0.5
2,565,351	+		BPHYT_RS11295	0.43	-3.0
2,565,352	-		BPHYT_RS11295	0.43	-0.6
2,565,352	-		BPHYT_RS11295	0.43	+0.8
2,565,791	-		BPHYT_RS11295	0.77	-0.4