Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS11155

Experiment: Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X
2,534,065	+				+1.9
2,534,065	+				+0.2
2,534,555	+		BPHYT_RS11150	0.52	+0.7
2,534,897	-		BPHYT_RS11150	0.89	-1.4
2,535,092	-		BPHYT_RS11155	0.15	+0.7
2,535,311	-				+1.3
2,535,663	-				-1.6
2,535,855	+				-3.5
2,535,871	+				-0.3
2,535,871	+				+0.8
2,535,871	+				+4.0
2,535,872	-				+1.0
2,535,983	+		BPHYT_RS11165	0.10	-0.5
2,536,080	-		BPHYT_RS11165	0.19	-0.5
2,536,080	-		BPHYT_RS11165	0.19	+0.3
2,536,259	+		BPHYT_RS11165	0.36	+0.2