Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS10610

Experiment: Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X
2,417,581	-		BPHYT_RS10605	0.36	+0.1
2,417,593	-		BPHYT_RS10605	0.37	-0.4
2,417,773	-		BPHYT_RS10605	0.55	+1.0
2,418,039	+		BPHYT_RS10605	0.82	+1.3
2,418,279	-				+0.5
2,418,344	+				-0.1
2,418,384	-				-1.0
2,418,836	-		BPHYT_RS10610	0.38	+0.7
2,418,936	+		BPHYT_RS10610	0.49	+1.1
2,418,936	+		BPHYT_RS10610	0.49	-1.9
2,418,937	-		BPHYT_RS10610	0.49	+1.1
2,419,395	+				+0.9
2,419,410	+				+0.7
2,419,411	-				+1.3
2,419,467	-				-2.1
2,419,505	+				-0.7
2,419,736	+		BPHYT_RS10615	0.39	-1.5
2,419,746	-		BPHYT_RS10615	0.40	-0.3
2,419,746	-		BPHYT_RS10615	0.40	+0.2