Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS09515

Experiment: Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X
2,156,193	+		BPHYT_RS09510	0.69	-0.8
2,156,194	-		BPHYT_RS09510	0.69	+0.1
2,156,472	+				+0.0
2,156,472	+				+0.9
2,156,472	+				-0.1
2,156,473	-				+0.8
2,156,544	+				-0.4
2,156,545	-				+0.0
2,156,917	-				-5.4
2,156,999	+				-1.2
2,157,544	-		BPHYT_RS09515	0.13	-0.9
2,158,379	-		BPHYT_RS09515	0.33	-1.9
2,159,394	-		BPHYT_RS09515	0.58	-1.3
2,160,166	+		BPHYT_RS09515	0.77	-3.7
2,160,166	+		BPHYT_RS09515	0.77	-2.9
2,160,167	-		BPHYT_RS09515	0.77	-0.9
2,160,503	+		BPHYT_RS09515	0.85	+0.6
2,160,816	-				-1.0
2,161,128	+				-1.9
2,161,240	+				-0.2
2,161,241	-				-0.2
2,161,706	+				-1.2
2,161,707	-				-0.3
2,161,795	+				+0.2