Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS09095

Experiment: Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X
2,057,112	-		BPHYT_RS09090	0.26	+0.1
2,057,235	-		BPHYT_RS09090	0.40	+0.5
2,057,366	+		BPHYT_RS09090	0.56	-1.7
2,057,494	+		BPHYT_RS09090	0.72	-0.7
2,057,495	-		BPHYT_RS09090	0.72	+1.1
2,057,537	+		BPHYT_RS09090	0.77	-0.1
2,057,538	-		BPHYT_RS09090	0.77	+0.6
2,057,602	+		BPHYT_RS09090	0.85	-0.4
2,057,603	-		BPHYT_RS09090	0.85	-1.5
2,057,603	-		BPHYT_RS09090	0.85	+0.7
2,058,211	+		BPHYT_RS09095	0.35	-1.8
2,058,277	+		BPHYT_RS09095	0.41	-1.1
2,058,278	-		BPHYT_RS09095	0.41	-0.3
2,058,698	-		BPHYT_RS09095	0.85	-1.5
2,058,880	+				-0.7
2,058,881	-				-0.1
2,059,010	+				-0.0
2,059,010	+				+1.3
2,059,256	+		BPHYT_RS09100	0.24	-0.6
2,059,256	+		BPHYT_RS09100	0.24	+0.4
2,059,257	-		BPHYT_RS09100	0.24	-1.1
2,059,315	+		BPHYT_RS09100	0.32	-1.3
2,059,316	-		BPHYT_RS09100	0.32	+0.6
2,059,316	-		BPHYT_RS09100	0.32	+0.3