Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS07925

Experiment: Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X
1,803,469	-		BPHYT_RS07915	0.74	-0.2
1,803,735	+		BPHYT_RS07915	0.89	-0.2
1,803,736	-		BPHYT_RS07915	0.89	+1.9
1,803,985	+		BPHYT_RS07920	0.17	-0.6
1,804,269	-				-0.4
1,804,287	-				-0.9
1,804,697	+		BPHYT_RS07925	0.52	+0.8
1,805,044	+				+0.2
1,805,045	-				-0.3
1,805,295	-				-0.6
1,805,449	+		BPHYT_RS07930	0.32	-0.3
1,805,449	+		BPHYT_RS07930	0.32	+0.1
1,805,449	+		BPHYT_RS07930	0.32	-0.3
1,805,450	-		BPHYT_RS07930	0.32	-0.0
1,805,450	-		BPHYT_RS07930	0.32	+1.4