Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS07690

Experiment: Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X
1,748,273	-		BPHYT_RS07680	0.88	+1.0
1,748,336	-				+0.6
1,749,230	-				-0.0
1,749,533	+		BPHYT_RS07690	0.26	+1.4
1,750,055	+		BPHYT_RS07690	0.76	+0.9
1,750,059	-		BPHYT_RS07690	0.76	+1.0
1,750,173	-		BPHYT_RS07690	0.87	+0.1
1,750,362	+				+0.2
1,750,362	+				+0.9
1,750,363	-				-0.2
1,750,363	-				-0.5
1,750,411	+				+1.2
1,750,411	+				+0.2
1,750,418	-				+0.3
1,750,420	+				-2.5
1,750,420	+				+0.2
1,750,835	+		BPHYT_RS07695	0.31	+1.0