Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS04750

Experiment: Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X
1,096,593	-		BPHYT_RS04745	0.38	-1.6
1,096,628	+		BPHYT_RS04745	0.41	-1.2
1,096,862	+		BPHYT_RS04745	0.58	-3.9
1,097,221	+		BPHYT_RS04745	0.86	-1.8
1,097,221	+		BPHYT_RS04745	0.86	-2.0
1,097,222	-		BPHYT_RS04745	0.86	+0.4
1,097,408	+				-1.2
1,097,438	-				-0.2
1,097,488	+				-1.8
1,097,531	+				-4.0
1,097,531	+				-1.2
1,097,568	-		BPHYT_RS04750	0.12	-2.8
1,097,568	-		BPHYT_RS04750	0.12	-0.4
1,097,804	-		BPHYT_RS04750	0.43	-1.6
1,098,530	-		BPHYT_RS04755	0.28	+1.5
1,098,530	-		BPHYT_RS04755	0.28	+0.2
1,098,530	-		BPHYT_RS04755	0.28	-0.2
1,098,686	-		BPHYT_RS04755	0.43	-0.2
1,099,003	+		BPHYT_RS04755	0.74	-0.7
1,099,003	+		BPHYT_RS04755	0.74	-0.3
1,099,004	-		BPHYT_RS04755	0.74	+1.4
1,099,225	+				+0.3