Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS04130

Experiment: Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X
944,206	-				+0.9
944,344	-				+0.4
945,018	+				+0.8
945,024	+				+0.2
945,568	+		BPHYT_RS04130	0.28	+0.9
945,710	-		BPHYT_RS04130	0.36	-0.1
945,784	+		BPHYT_RS04130	0.40	-0.6
945,784	+		BPHYT_RS04130	0.40	+0.8
945,957	-		BPHYT_RS04130	0.49	+0.7
946,206	+		BPHYT_RS04130	0.62	+0.2
946,232	+		BPHYT_RS04130	0.63	+2.0
946,587	-		BPHYT_RS04130	0.82	-1.9
946,661	+		BPHYT_RS04130	0.86	+0.4
946,666	+		BPHYT_RS04130	0.86	+0.8
946,667	-		BPHYT_RS04130	0.86	+1.3
946,822	-				+1.1
947,049	-				+0.5