Strain Fitness in Sinorhizobium meliloti 1021 around SMa1635

Experiment: Parafilmed volatile agar plate with no fungus

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 nt SMa1635: SMa1635 - hypothetical protein, at 910,181 to 910,639 SMa1635 Position (kb) 910 911Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3at 909.212 kb on + strandat 909.411 kb on + strandat 909.411 kb on + strandat 909.412 kb on - strandat 909.412 kb on - strandat 909.413 kb on + strandat 909.413 kb on + strandat 909.413 kb on + strandat 909.414 kb on - strandat 909.414 kb on - strandat 909.419 kb on - strandat 909.535 kb on + strandat 909.597 kb on + strandat 909.612 kb on + strandat 909.613 kb on - strandat 909.733 kb on + strandat 909.734 kb on - strandat 909.735 kb on + strandat 909.735 kb on + strandat 909.735 kb on + strandat 909.736 kb on - strandat 909.926 kb on + strandat 909.927 kb on - strandat 909.927 kb on - strandat 909.977 kb on + strandat 909.978 kb on - strandat 909.978 kb on - strandat 909.978 kb on - strandat 910.002 kb on + strandat 910.094 kb on - strandat 910.095 kb on + strandat 910.095 kb on + strandat 910.095 kb on + strandat 910.095 kb on + strandat 910.096 kb on - strandat 910.187 kb on + strandat 910.330 kb on + strand, within SMa1635at 910.927 kb on + strandat 911.056 kb on + strandat 911.069 kb on - strandat 911.089 kb on + strandat 911.115 kb on - strandat 911.141 kb on - strandat 911.172 kb on + strandat 911.217 kb on + strandat 911.217 kb on + strandat 911.217 kb on + strandat 911.218 kb on - strandat 911.218 kb on - strandat 911.246 kb on - strandat 911.255 kb on + strandat 911.256 kb on - strandat 911.279 kb on + strandat 911.389 kb on + strandat 911.390 kb on - strandat 911.397 kb on + strandat 911.398 kb on - strandat 911.408 kb on - strandat 911.534 kb on - strandat 911.619 kb on - strandat 911.620 kb on + strandat 911.620 kb on + strandat 911.621 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Parafilmed volatile agar plate with no fungus
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909,212 + -0.6
909,411 + +1.2
909,411 + +0.8
909,412 - +2.0
909,412 - -1.2
909,413 + -1.9
909,413 + +1.1
909,413 + -3.5
909,414 - +0.1
909,414 - -1.3
909,419 - -0.5
909,535 + -0.0
909,597 + +1.0
909,612 + +0.7
909,613 - -1.1
909,733 + -0.3
909,734 - +2.9
909,735 + -2.2
909,735 + -0.4
909,735 + -2.2
909,736 - +2.0
909,926 + -1.8
909,927 - -0.1
909,927 - +0.8
909,977 + +0.3
909,978 - +1.0
909,978 - -0.9
909,978 - -0.1
910,002 + -0.3
910,094 - -2.2
910,095 + -0.8
910,095 + +0.4
910,095 + +0.4
910,095 + +3.1
910,096 - +0.3
910,187 + -0.9
910,330 + SMa1635 0.32 +0.0
910,927 + -0.3
911,056 + +0.9
911,069 - -0.3
911,089 + +0.8
911,115 - +0.5
911,141 - +0.3
911,172 + -2.9
911,217 + +0.4
911,217 + -0.8
911,217 + -2.4
911,218 - +0.2
911,218 - -2.5
911,246 - +0.3
911,255 + +0.6
911,256 - +0.5
911,279 + +0.4
911,389 + +1.0
911,390 - +2.1
911,397 + -0.0
911,398 - +0.4
911,408 - +0.5
911,534 - +0.1
911,619 - +0.1
911,620 + -0.2
911,620 + -0.3
911,621 - -0.6

Or see this region's nucleotide sequence